About us

Single Cell Discoveries makes single-cell sequencing accessible for everyone

Single Cell Discoveries provides complete single-cell sequencing services. We help you get the best out of your single-cell experiments by offering everything you need for a successful project - planning, experiments, and data analysis - under one roof.

Founded in 2018 in Utrecht, the Netherlands, SCD has serviced 150+ researchers from more than 60 institutes and companies across 15 countries. As well as making single-cell sequencing accessible to a wide research community, we are committed to continuous development and offering the very latest single-cell sequencing technologies.

Some key statistics

  • Founded in 2018
  • Team of 11
  • 150+ customers
  • More than 80 institutes and companies served
  • Customers across 15 countries
  • 1,958,384 single cells sequenced
  • 2.32 trillion reads sequenced
  • 4 different services available

About the founders

Judith Vivié and Mauro Muraro founded Single Cell Discoveries after working together in the Alexander van Oudenaarden lab at the Hubrecht Institute in Utrecht, the Netherlands. They worked on some of the earliest single-cell sequencing technologies, back when every single cell had to be handled manually.

During his PhD, Mauro devised the SORT-seq technique to automate this process, which was published on Cell Systems in 2016. As demand rapidly grew for single-cell sequencing, the Hubrecht Institute Single Cell Core Facility was established, with Judith as its general manager. The core facility, one of the first in the world, quickly grew to service customers from many different research groups both inside and outside the Hubrecht Institute.

When Judith and Mauro realized that there was an urgent need for expert services in the single-cell sequencing field, they decided to team up to start Single Cell Discoveries. Since the very beginning, their goal has been the same: to make single-cell sequencing available to everyone.


To provide high-quality, state-of-the-art single-cell sequencing methods and expertise. To contribute to ground-breaking research. To develop and implement single-cell technologies fit for use in clinical settings.


We believe that current and future single-cell technologies should be easily accessible to everyone, everywhere.

Our team

Meet our team of talented and experienced scientists

and get to know their inner nerd  

Mauro Muraro

Co-founder & CEO

Mauro is responsible for steering SCD in the right direction, setting up scientific collaborations and to keep pushing single-cell sequencing technology to new heights. He loves using technology to solve complex biological questions. Before founding SCD, Mauro finished his PhD at the Hubrecht Institute (van Oudenaarden lab), where he developed the SORT-seq platform for single-cell sequencing. His inner nerd is triggered by all things quantitative, and he knows many obscure Greek Mythology stories.

Judith Vivié

Co-founder and COO

As COO, Judith is responsible for many things: from running client experiments in the lab to handling the financial administration of the company. Prior to starting Single Cell Discoveries, she worked as a manager at the core facility for single-cell sequencing in the Hubrecht Institute. Judith has an MSc degree in Cancer, Stem Cells & Development from Utrecht University. She is an aficionado for lab robots and gets her inner nerd excited by sharing her love for automation with others.

Bastiaan Bijl

Head of Business Development

Bastiaan is responsible for Marketing, Sales, and Business Development at Single Cell Discoveries. He loves to talk to (potential) customers and discuss their scientific projects to figure out how we can help. Bastiaan has a knack for automation and tries to automate his day-to-day tasks as much as possible. With an MSc in Science & Business Management and a background in consulting, his inner nerd is triggered by Excel spreadsheets.

Lotte Koopman

Head of Laboratory Operations

Lotte is highly meticulous and loves a perfectly organized lab, making her our ideal lab manager. She manages the daily operations of the laboratory and oversees the processing of customer samples, lab safety, and QC. Before joining SCD, she completed her Ph.D. at the UMC Utrecht and the Hubrecht Institute, where she gained extensive experience with genetics and with project management. In her free time, Lotte enjoys traveling and photography, and she is currently improving her programming skills with R and Python.

Dylan Mooijman

Head of R&D


Dylan is responsible for developing new technologies and improving methods that we currently have. He loves working on the cutting edge of new single cell sequencing techniques in order to always provide the proverbial hammer for every experimental nail. Before coming to SCD, Dylan was a postdoc and HFSP fellow at EMBL Heidelberg (Ephrussi lab) and prior to that a PhD student in the van Oudenaarden lab (Hubrecht Institute). Apart from molecular biology, Dylan loves classic literature and brazilian jiu-jitsu, both of which are totally not nerdy at all.

Chalene Ehlers

Office Manager

Chalene focuses on financial administration and HR at Single Cell Discoveries. She has come all the way from South Africa where she obtained her qualification in Marketing and Business Management. She has a strong background in customer relations and staff management. Her management expertise stems from various senior management positions, where she was responsible for excellence, HR duties and the general management. For her hobbies, Chalene loves to scuba dive, cuddle with her fur-babies, walks, and meeting new people.

Hannah Oevermans

Junior Marketing Manager

Hannah focuses on digital marketing at Single Cell Discoveries. She has a Master's degree in Science & Business Management and a BSc degree in Biomedical Sciences, both obtained at Utrecht University. She finished her Master program at Single Cell Discoveries with a marketing internship and her thesis about branding. Before she joined SCD, she completed a research internship on acute infant leukemia at the Princess Máxima Center for Pediatric Oncology. Her inner nerd is triggered by board games and unsolved mysteries.

Julia Strengers portrait photo
Julia Strengers Portrait Photo Labcoat

Julia Strengers

Junior Account Manager

Julia helps our clients figuring out the best service for their project. Julia completed the Bachelor Nutrition & Health (Wageningen University) and the Master Science & Business Management (Utrecht University). During her masters she wrote a scientific paper on the association between the Mediterranean diet and heart failure (UMC Utrecht) and studied the organizational culture of scale-ups to graduate (TEN HAVE Change Management). In her free time, Julia loves to spend time in nature, play sports and meet new people.

Doreth Fransen

Junior Scientist

Doreth works as a Junior Scientist in our R&D department. Currently, she focuses on improving our SORT-seq single-cell sequencing platform, and expanding her knowledge on other sequencing techniques. Prior to joining Single Cell Discoveries, she completed her Bachelor of Applied Sciences in Biotechnology (with a major in Forensic Sciences) at Van Hall Larenstein and graduated from her Master's in Biology of Disease at Utrecht University. In her spare time, she enjoys thrill-seeking sports such as snowboarding and kitesurfing.

Nathalie Groen

Data Scientist

Nathalie helps our customers get the most out of their data as a part-time data scientist. Next to that, she is a PostDoc at the Hubrecht Institute, where she works on building a cell atlas on the human pancreas. Being a biomedical engineer, she obtained her Ph.D. in computational biology at the University of Twente. She first started working with single-cell data as a PostDoc when studying β-cell biology in the context of diabetes. At home, she is using Raspberry Pi's to smarten things up.

Janneke Hulsen portrait photo
Janneke Hulsen Portrait Photo Labcoat

Janneke Hulsen

Data Scientist

Janneke analyzes and interprets single-cell sequencing data to uncover useful insights. She studied Philosophy and Biomedical Sciences, specializing in immunology with a Master's degree in Infection & Immunity. Next to performing data analyses at SCD, she follows a second master’s in Bioinformatics to further expand her programming skills. Her inner nerd is excited to learn programs and languages: from Spanish and Illustrator to R. Janneke recognizes any common wild bird within 0.1 seconds.

Jan Willem Wijnands portrait photo
Jan Willem Wijnands Portrait Photo Labcoat

Jan Willem Wijnands

Junior Data Manager

Jan Willem's main focus is on maintaining and improving the data analysis pipeline at Single Cell Discoveries. He completed his BSc degree in Bioinformatics at the University of Applied Sciences Leiden and his MSc degree in Evolutionary Biology at Leiden University. During his research internships, he mainly worked on the phylogenetics of bacteria, orchids and banded newts at Institute Biology Leiden and Naturalis Biodiversity Center. During off-duty time, his inner nerd gets triggered by all types of gadgets to establish a smarter home!

Anneleen Bobeldijk

Lab Technician

Anneleen works as a lab technician at Single Cell Discoveries and is responsible for running experiments, sample shipments, and lab maintenance. Before joining SCD, she completed her BSc in Life Sciences from the University of Applied Sciences Utrecht. She did internships in Israel at the Sheba Medical Center and at the Netherlands Institute for Neuroscience. After joining SCD and working with the robots, she became interested in programming and is currently developing her inner nerd by becoming a Python genius.

Stefani Giacopazzi

Lab Technician


Stefani focuses on sample processing, sample shipments, and general lab maintenance. She is originally from California and completed her BSc in Molecular, Cell and Developmental Biology at the University of California, Santa Cruz. As a lab technician at UCSC, she became excellent at C. elegans genetics and microinjecting worms with CRISPR/Cas9 ribonucleoprotein complexes. Her inner nerd is obsessed with the human microbiome, tropical plants, and exploring recipes from all over the world.

Lovindy Lebalado

Lab Technician


Lovindy is responsible for sample processing, sample shipments, and general lab maintenance. She was born and raised in Indonesia, where she obtained her Bachelor’s in Nutrition Science. After her Bachelor's degree, she moved to the Netherlands to obtain her Master’s in Molecular Nutrition and Toxicology at Wageningen University. Before SCD, she has gained experience in panel sequencing as a lab technician for the NGS lab at Macrogen Europe. In her free time, she can be found creating new recipes or taking care of her plant colony.

Advisory board


Advisory board member

Prof. Dr. Ir. Alexander van Oudenaarden gained his PhD in physics in 1998 from Delft University, the Netherlands.

After a postdoc at Stanford, he moved to MIT in Cambridge, MA in 2000 and became Professor of Physics in 2008, as well as Professor of Biology in 2009.

In 2012 he moved back to the Netherlands to become director of the Hubrecht Institute for Developmental Biology and Stem Cell Research and professor of quantitative biology of gene regulation at the University Medical Center Utrecht and Utrecht University.

He has been a member of the Royal Netherlands Academy of Arts and Sciences since 2014.

Alexander van Oudenaarden
John Groten


Advisory board member

Prof. Dr. Ir. John Groten is the managing director of PamGene and a visiting professor at Wageningen University.

He is an experienced business leader with over 30 years of management experience in life science research companies.

After gaining his PhD at Wageningen University in 1992, he started his career at TNO before joining various other life science companies and contract research organizations.

He describes himself as "Change manager to enhance quality, creativity, and business insight in organizations", which sums up the expertise that he brings to Single Cell Discoveries.




Advisory board member

Dr. Menzo Havenga is Founder, President & CEO of Batavia Biosciences and Batavia Biopharma since company launch in 2010.

After obtaining his PhD degree in molecular virology at the University of Leiden, he worked as a Senior scientist and subsequently Director Research at IntroGene B.V. until 2001.

He then continued his career as Vice president Research and Development at Crucell until 2007, followed by joining TNO as the Managing Director Business Unit Biosciences.

Menzo Havenga - Advisory board member

Support partners

Hubrecht Institute

Oncode Institute