Every cell is different, just as every project is different. We help you fuel your biological breakthroughs by tackling your single-cell RNA sequencing challenges with you. Tailor-made to your project. From cells to data. From start to finish.

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Hubrecht Institute


With different (single-cell) platforms available in our portfolio, there is always a solution that suits your needs. Learn about the technologies we offer and how they can accelerate your research.


Cost-effective, plate-based single-cell transcriptomics platform.

10x Genomics

High-throughput single-cell gene expression or single-cell immune profiling analysis.


Full-length, total RNA single-cell sequencing platform.

bulk RNA sequencing

Don't need single-cells? Try our highly cost-effective bulk RNA seq services.

Visium Spatial Gene Expression

Add tissue context to your transcriptome data

How we work

Science is not a fixed process. We get that. As you go along, plans change and hypotheses along with them. As your trusted partner, we help you with every step in the process, from project design to data analysis and beyond. And when you've completed your project, we'll help you plan the next step.


We'll help you design your first single-cell sequencing project and make sure it matches your biological question and fits your budget. With multiple options and technologies available, we'll always find a match for your project.



Send us your samples and we’ll take care of the rest. We'll process your sample and generate ready-to-analyze data, while applying all the necessary QC steps throughout to ensure optimal quality of the outcome.


To help you hit the ground running, we include a preliminary clustering and differential gene expression analysis with all our services. If you need dedicated data analysis support, we’ll send in the bioinformatics cavalry.

Research areas

Single-cell sequencing is used in many different areas of research. Whether your focus is Immunology, Oncology, Neuroscience or any problem in need of a single-cell solution: we can help.


Assess tumor heterogeneity. Gain insight into mechanisms driving metastasis or therapy resistance.

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Characterize immune cell types. Identify antigen specificity. Discover molecular drivers.

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Developmental biology

Unravel developmental processes. Discover molecular mechanisms behind development, congenital disease, or regeneration.

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Gain insight into the complexity of the nervous system. Identify molecular mechanisms of neural function, disease and injury.

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Our Services

As single-cell sequencing specialists, we help you with every step in the process. Whether you want to start with a small pilot project or just need routine high-throughput services, we can help. Learn more about our different services.

Scientists working in the lab with pcr machines
Data analysis

Video explanation

This video explains more about how we work.

Succes stories

Learn more about the results from our services - from a client perspective.


Our latest news, updates and other important happenings.

Kelly, welcome to the team!

We are happy to announce that Kelly Klaassen has joined the team as a Marketing Intern. During her internship for Single Cell Discoveries, she will be responsible for investigating the needs and wants of commercial clients, which can be used for improving Single Cell Discoveries’ offerings. Kelly completed her BSc degree in Biology and Medical…

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Transcriptome of human FDCs reveals role in antigen presentation to B cells and regulation of T cells 

In this blog, we will discuss the contribution of single-cell RNA sequencing to uncovering the function of human follicular dendritic cells (FDCs) in the germinal center (GC) microenvironment.    The GC is a structure in secondary lymphoid tissues, such as tonsils, in which long-lived antibody-secreting plasma cells and memory B cells are produced. Within the GC,…

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Andrei, welcome to the team!

We are happy to announce that Andrei Prodan has joined SCD as our new Head of Data Science, where he will coordinate the SCD Data Science team, update and maintain the computational infrastructure and bioinformatics pipelines and manage research collaborations and projects. Andrei is originally from Deva, a small town in Transylvania, Romania. After earning…

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