Bulk RNA sequencing

Cell Reports March, 2022 by Joep Beumer, et al.

BMP gradient along the intestinal villus axis controls zonated enterocyte and goblet cell states

• DOI: 10.1016/j.celrep.2022.110438
• PMID: 35235783

• Services: Bulk RNA sequencing, SORT-seq
• Species: Human, Mouse
• Sample type: Intestine

Cell Death & Disease June, 2021 by Andreas Lindhorst, et al.

Adipocyte death triggers a pro-inflammatory response and induces metabolic activation of resident macrophages

• DOI: 10.1038/s41419-021-03872-9
• PMID: 34091595

• Services: Bulk RNA sequencing
• Species: Mouse
• Sample type: Adipose tissue, Immune system

BioRxiv January, 2021 by Hartman et. al.

Sex-dependent gene regulation of human atherosclerotic plaques by DNA methylation and transcriptome integration points to smooth muscle cell involvement in women

• DOI: 10.1101/2021.01.28.428414

• Services: Bulk RNA sequencing, SORT-seq
• Species: Human
• Sample type: Arterial system

The EMBO Journal January, 2021 by Mart M Lamers et. al.

An organoid-derived bronchioalveolar model for SARS-CoV-2 infection of human alveolar type II-like cells

• DOI: 10.15252/embj.2020105912
• PMID: 33283287

• Services: 10x Genomics, Bulk RNA sequencing, Data analysis
• Species: Human
• Sample type: Lung, Organoids

BioRxiv March, 2019 by Frias-Aldeguer et al.

Embryonic signals perpetuate polar-like trophoblast stem cells and pattern the blastocyst axis

• DOI: 10.1101/510362

• Services: Bulk RNA sequencing, SORT-seq
• Species: Mouse
• Sample type: Stem cells

Cancer discovery July, 2019 by Driehuis et al.

Oral Mucosal Organoids as a Potential Platform for Personalized Cancer Therapy

• DOI: 10.1158/2159-8290.CD-18-1522
• PMID: 31053628

• Services: Bulk RNA sequencing
• Species: Human, Mouse
• Sample type: Stem cells

Cell June, 2020 by Beumer et al.

High-Resolution mRNA and Secretome Atlas of Human Enteroendocrine Cells

• DOI: 10.1016/j.cell.2020.04.036
• PMID: 32407674

• Services: Bulk RNA sequencing, SORT-seq
• Species: Human
• Sample type: Intestine

BioRxiv April, 2020 by Lindhout et al.

Quantitative mapping of transcriptome and proteome dynamics during polarization of human iPSC-derived neurons

• DOI: 10.1101/2020.04.21.052498

• Services: Bulk RNA sequencing, SORT-seq
• Species: Human
• Sample type: Brain, Stem cells

Cell February, 2019 by Gehart et al.

Identification of Enteroendocrine Regulators by Real-Time Single-Cell Differentiation Mapping

• DOI: 10.1016/j.cell.2018.12.029
• PMID: 30712869

• Services: Bulk RNA sequencing, SORT-seq
• Species: Mouse
• Sample type: Intestine, Stem cells

EMBO Reports July, 2017 by Dierickx et al.

Circadian networks in human embryonic stem cell‐derived cardiomyocytes

• DOI: 10.15252/embr.201743897
• PMID: 28536247

• Services: Bulk RNA sequencing
• Species: Human
• Sample type: Heart

Science July, 2020 by Lamers et al.

SARS-CoV-2 productively infects human gut enterocytes

• DOI: 10.1126/science.abc1669
• PMID: 32358202

• Services: Bulk RNA sequencing
• Species: Human
• Sample type: Intestine, Lung

Cell January, 2020 by Post et al.

Snake Venom Gland Organoids

• DOI: 10.1016/j.cell.2019.11.038
• PMID: 31978343

• Services: Bulk RNA sequencing, SORT-seq
• Species: Snake
• Sample type: Salivary gland, Stem cells