Single-Cell, Bulk & Spatial Services Fast, high-quality transcriptomics services
Our team runs your project end to end, from sample strategy and experimental design to sequencing and data analysis, so you can outsource with confidence and focus on the biology.
Trusted by
Transcriptomics services with proven expertise
Built on experience, not just workflows
We provide bulk, single-cell, and spatial transcriptomics services grounded in experience and technical rigor. Our team works as an independent partner to design and execute experiments that deliver reliable data and scale with your research goals.
Download Our Services Brochure
Explore our complete portfolio of single-cell, bulk and spatial transcriptomics services, and how they fit your research.
Why choose SCD?
We are the transcriptomics experts
- Developing single-cell technologies since 2012
- Fast turnaround times (under 4 weeks)
- Experts in bulk, single-cell, and spatial transcriptomics
- Experience with low-input and precious samples
- Sequenced 50+ species and tissue types
- Proprietary assays and assay development
Unmatched expertise in single-cell
We have worked with single-cell since the early days, across multiple technology generations. Across 50+ organisms and 30+ tissue types, we’ve seen how workflows behave in real biological edge cases. That experience helps us anticipate risks early and deliver decision-ready data.
Technology choices you can trust
We continuously evaluate new platforms through internal R&D and real-world validation. We adopt technologies only when they clearly improve data quality, robustness, or interpretability. When commercial options fall short, we build and validate proprietary assays and workflows.
We are your collaborative partner
We act as a thought partner, not just a service provider. We help shape experimental design, make trade-offs explicit, and align work with downstream objectives. This approach supports complex, multi-phase programs where confidence and consistency matter.
What our clients say
"SCD performed a single-cell immune and protein profiling analysis using a bespoke panel on a large set of our blood samples, generating a high-quality dataset. They did a fantastic job in performing the wet lab workflow, ensuring minimal batch effects. The team was professional and responsive, actively working with us to optimize the experimental design and kit chemistry to meet our analytical goals. We were impressed by the overall quality."
Duncan McKenzie, Discovery Lead at IMU Biosciences
"The service of Single Cell Discoveries guarantees a smooth process between customer and company. In case of problems or questions, the scientists reacted competently and immediately, so that answers could be found quickly and flexibly."
Prof. Dr. Stella Autenrieth, Research Group Leader at German Cancer Research Center
"Fantastic job made by a really professional and friendly team. I strongly recommend Single Cell Discoveries for sequencing services."
Samuel García Pérez, Principal Investigator at Galicia Sur Health Research Institute
"Every step of the process has been perfect, starting from the initial informative meeting, where I received useful suggestions, to the experimental phase, which was carried out very quickly. Additionally, communication has been prompt and highly effective."
Andrea Ghiroldi, Staff Scientist at Italfarmaco
"I had a great experience working with Single Cell Discoveries. Service was of excellent quality and fast, and I really appreciated your personalized guidance. I would like to highlight how great it was to work with the data team; it was very easy to communicate with them, and they analyzed our challenging data set exactly as we had in mind, always making sure to understand our needs."
Marta Cuenca-Lopera, Assistant Professor at Center for Translational Immunology, UMC Utrecht
Case studies
Snake Venom Gland Organoids
Three PhD students, under the supervision of Prof. Dr Hans Clevers in molecular genetics and snake expert Prof. Dr Freek Vonk, conducted this remarkable research in which they developed snake venom-producing organoids. The organoids were characterized using SORT-seq. Here, we explain how the project was done.
Recent publications
Oncogene
Differential transcriptional invasion signatures from patient derived organoid models define a functional prognostic tool for head and neck cancer
Journal of Autoimmunity
Trained innate immunity in response to nuclear antigens in systemic lupus erythematosus
The Journal of Immunology
Single-cell Sequencing of Circulating Human Plasmablasts during Staphylococcus aureus Bacteremia
Services Brochure
Discover our single-cell sequencing solutions
Download our complete portfolio of single-cell, bulk, and spatial transcriptomics services, and learn how they fit your research.
Unmatched expertise in single-cell
Technology choices you can trust
We are your collaborative partner


