Accelerate your research

Single Cell
Sequencing
Berlin

Single Cell Discoveries, top provider of single-cell RNA sequencing services in Berlin, is committed to supporting researchers and scientists in the area to access the boundless potential of this advanced technology.

Learn more  Our services

Single-Cell Sequencing in Developmental Biology

Single-Cell Sequencing
Service Provider in Berlin

Single-cell RNA sequencing is a state-of-the-art technology that enables researchers to conduct gene expression analysis at the level of individual cells. Our facility, based in the Netherlands, offers high-quality and reliable single-cell sequencing services to scientists and researchers in the region. Utilizing advanced automated techniques and cutting-edge technology, our team of experienced scientists delivers accurate results.

Our experience is unmatched in the field

Our advanced approach to transcriptomics has proven particularly useful in the study of complex tissues and systems, as it allows for the examination of gene expression profiles at the single-cell level rather than relying on averages of whole-tissue processing.

We offer a range of customizable options

Our customizable options, including various sequencing platforms and downstream analysis services, ensure that researchers have the necessary tools and support to achieve their objectives. Whether it be studying a specific tissue or cell type or gaining new insights into a complex system, we make the technology accessible to you.

Shipping from Berlin

Samples can be conveniently shipped to us from Germany via reputable couriers such as Deutsche Post DHL and FedEx. We also offer the option to order cell-capture plates online for SORT-seq or VASA-seq, with delivery to your location. Our team is committed to providing exceptional support and assistance to our clients.

If you are interested in learning more about how our single-cell RNA sequencing services can advance your research, we invite you to schedule a consultation with our team. We are readily available to answer any questions you may have and provide further information on how we can support your research goals.

Get the Information Guide

Download our information guide to access an overview of Single Cell Discoveries, explore our single-cell sequencing services, learn how to get started, and gain more valuable insights.

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Our services

We offer single-cell, spatial and bulk transcriptomics.

Our R&D team is actively developing novel single-cell sequencing technologies,
multi-omic applications and spatial transcriptomics.

Single-cell sequencing
Scientist performing SORT-seq
SORT-Seq

Single-cell transcriptomics method utilizing 384-well plates, ideal for low cell counts, FACS sorted populations, and pilot projects. Developed by our founder, exclusively offered by us.

Scientist performing 10x Genomics
10x Genomics

Certified Service Provider of the 10x Genomics Single Cell Gene Expression and Single Cell Immune Profiling solutions, ideal for high- throughput applications.

Scientist performing VASA-seq
VASA-Seq

Single-cell RNA sequencing method for full- length and total RNA, ideal for analyzing non- coding RNA and complete transcriptomes. Developed by one of our team members, exclusively offered by us.

Spatial transciptomics
10x Genomics Visium Spatial Gene Expression
Spatial Transriptomics

Transcriptomics method for analysis of spatial gene expression and histology, ideal for the study of cell localization and cell-cell interactions.

Pooled cells
Bulk RNA Sequencing

Comprehensive transcriptome analysis of pooled cell populations, ideal for limited starting material and large projects requiring cell population data.

Dr. Bram Slütter Leiden Academic Centre for Drug Research

“It’s the expertise that Single Cell Discoveries has in single-cell and T cell receptor sequencing, even though you are flexible, that makes it preferential for us to work with an industry partner like you.”

Dr. Samuel García Pérez Galicia Sur Health Research Institute

"Fantastic job made by a really professional and friendly team. I strongly recommend Single Cell Discoveries for sequencing services."

Dr. Vanessa LaPointe MERLN Institute for Technology-Inspired Regenerative Medicine

“What we appreciate most is the nature of the collaboration. With Single Cell Discoveries, we could discuss the design of our 10x Genomics experiments, which analyses to do, and how to solve our challenges.”

The premier single-cell CRO

Accelerate your research with our tailored single-cell sequencing solutions

Located in Utrecht, the Netherlands, our purpose-built single-cell sequencing lab is operated by a team of PhD-level scientists, some of whom have pioneered the single-cell platforms we employ to deliver exceptional service. At Single Cell Discoveries, we are dedicated to crafting customized solutions for your unique challenges, ensuring rapid turnaround times, and unlocking high-impact biological insights. We eat, sleep, and breathe single-cell biology so you can focus on advancing your discovery program.

Accelerate your research with our tailored single-cell RNA sequencing solutions
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How we supercharge
your research

Project Design

  • Strategize with our PhD-level account executives to decide between multiple single-cell technologies, including two exclusively offered by us.
  • Leverage our experience with 200+ clients over 1000+ unique projects.
Process

Sample Processing

  • Run in our purpose-built single-cell lab with Illumina Novaseq X.
  • Benefit from our experience with 8500+ samples sequenced in 40+ organisms and 30+ tissue types with over 10M single cells sequenced.

Data Analysis

  • Gain quick insights into your single-cell data with our preliminary analysis report with QC, clustering, and differential gene expression.
  • Uncover biological insights through custom data analysis with our bioinformaticians who have processed over 50 terabytes of single-cell data.
Person having online consultation
Step 1

Consultation

Every project starts with one or more free consultations because no two single-cell projects are the same. Our experienced PhD-level team discusses your biological question, sample type, planning, data analysis options, and other wishes. This will ensure you select the best method for your project and can hit the ground running.

Person working in hood and second person working with PCR machine
Step 2

Sample Preparation

For 10x Genomics, create a single-cell suspension from your sample and either cryopreserve or methanol-fix the cells. For SORT-seq, FACS-sort the single cells into the wells of our cell capture plates. Then, send your samples to our lab on dry ice. In the case of nuclei, the sample preparation depends on the project. 

Person loading Illumina NextSeq2000
Step 3

Processing in Our Lab

Our experienced team performs the 10x Genomics protocol in our lab. We sequence the libraries on our Illumina NovaSeq X Plus or NextSeq 2000. We'll do multiple QC checks and keep you informed of the status of your project.

Exploring data analysis
Step 4

Data Analysis

Our data team performs preliminary data analysis using a Seurat pipeline, checks the data quality and discusses irregularities with our lab team if necessary. You will receive the raw data files, data report, and guiding explanations. Talk to our data consulting team for help or request additional assessments such as pseudotime and gene set enrichment analysis.

FAQ
Which single-cell sequencing technology should I choose for my project?

That depends on your biological question, sample type, and budget. Feel free to schedule a meeting with one of our experts to discuss your project in more detail. We'll make sure to advise you on the best platform for your project.

Information Guide

Discover our single-cell sequencing solutions

Download our information guide to access an overview of Single Cell Discoveries, explore our single-cell sequencing services, learn how to get started, and gain more valuable insights.